Disclaimer
Preface
Acknowledgements
MEGA Software Development Team
Copyright
Citing MEGA in Publications
Part I: Getting Started
    First Time User
    What's New in Version 6
    Installing MEGA
    Features & Support
    A Walk Through MEGA
       Introduction
       Mega Basics
       Aligning Sequences
       Estimating Evolutionary Distances
       Building Trees from Sequence Data
       Testing Tree Reliability
       Working With Genes and Domains
       Testing for Selection
       Managing Taxa with Groups
       Computing Sequence Statistics
       Building Trees from Distance Data
       Constructing Likelihood Trees
       Editing Data Files
       Constructing a Time Tree (ML)
Part II: Assembling Data for Analysis
Part III: Input Data Types and File Format
Part IV: Evolutionary Analysis
Part V: Visualizing and Exploring Data and Results
Appendix A: Frequently Asked Questions
Appendix B: Main Menu Items and Dialogs Reference
Appendix C: Error Messages
Glossary
References