Statistics Menu (in Sequence Data Explorer)

Various summary statistics of the sequences can be computed and displayed using this menu. The commands are:

Nucleotide Composition.

Nucleotide Pair Frequencies.

Codon Usage.

Amino Acid Composition.

Use All Selected Sites.

Use only Highlighted Sites. Sites can be selected according to various criteria (see Highlight Sites), and analysis can be performed only on the chosen subset of sites.