Disclaimer
Preface
Acknowledgements
MEGA Software Development Team
Copyright
Citing MEGA in Publications
Part I: Getting Started
Part II: Assembling Data for Analysis
Part III: Input Data Types and File Format
    MEGA Input Data Formats
    Importing Data from other Formats
    Genetic Code Tables
    Viewing and Exploring Input Data
       Sequence Data Explorer
          Sequence Data Explorer
          Data Menu
          Display Menu
          Highlight Menu
             General Description
             Highlight Conserved Sites
             Highlight Variable Sites
             Highlight Singleton Sites
             Highlight Parsimony Informative Sites
             Highlight 0-fold Degenerate Sites
             Highlight 2-fold Degenerate Sites
             Highlight 4-fold Degenerate Sites
             Highlight Special
                Highlight Coverage
                Highlight CpG/TpG/CpA
          Statistics Menu
       Search Menu
       Distance Data Explorer
       Text Editor
    Visual Tools for Data Management
Part IV: Evolutionary Analysis
Part V: Visualizing and Exploring Data and Results
Appendix A: Frequently Asked Questions
Appendix B: Main Menu Items and Dialogs Reference
Appendix C: Error Messages
Glossary
References