Tajima's Test (Relative Rate)
Tajima's Test of Neutrality
Tajima-Nei distance
Tajima-Nei distance
Tamura (1992) Distance Could Not Be Computed
Tajima's Test (Relative Rate)
Tajima's Test of Neutrality
Tamura-Nei distance
Tamura-Nei Distance Could Not Be Computed
Tamura-Nei gamma distance
Tamura-Nei distance
Tamura-Nei gamma distance
Average Menu (in Distance Data Explorer)
Average Menu (in Distance Matrix Explorer)
Compute Between Groups Means
Compute Net Between Groups Means
Compute Within Groups Mean
Data Menu (in sequence Data Explorer)
Display Menu (in Distance Data Explorer)
Display Menu (in Distance Matrix Explorer)
Distance Data Explorer
Distance Data Subset Selection
Distance Matrix Explorer
File Menu (in Distance Data Explorer)
General Considerations (Distance Data Formats)
Minimum Evolution
Missing data or invalid distances in the matrix
Monophyletic
Neighbor Joining (Construct Phylogeny)
Neighbor-Joining (NJ) Method
Rules for Taxa Names
Sequence Data Explorer
Sequence Data Subset Selection
Setup/Select Taxa & Groups
Setup/Select Taxa & Groups Dialog
View Menu (in Tree Explorer)
Writing Command Statements for Defining Groups of Taxa
Average Menu (in Distance Data Explorer)
Average Menu (in Distance Matrix Explorer)
Compute Between Groups Means
Compute Net Between Groups Means
Compute Within Groups Mean
Data Menu (in sequence Data Explorer)
Distance Data Explorer
Sequence Data Explorer
Writing Command Statements for Defining Groups of Taxa
Distance Matrix Explorer
Minimum Evolution
Neighbor Joining (Construct Phylogeny)
Neighbor-Joining (NJ) Method
Setup/Select Taxa & Groups Dialog
View Menu (in Tree Explorer)
Distance Data Explorer
Sequence Data Explorer
Display Menu (in Distance Data Explorer)
Display Menu (in Distance Matrix Explorer)
Distance Data Explorer
Distance Matrix Explorer
Rules for Taxa Names
Setup/Select Taxa & Groups Dialog
Tree tab (in Options dialog box)
View Menu (in Tree Explorer)
Codon Based Fisher's Exact Test
Codon Based Z-Test (large sample)
Codon Based Fisher's Exact Test
Codon Based Z-Test (large sample)
Main MEGA Window
Selection Menu
Copy (in Text Editor)
Cut (in Text Editor)
Exit Editor (in Text Editor)
Find (in Text Editor)
Find Again (in Text Editor)
Font (in Text Editor)
New (in Text Editor)
Open (in Text Editor)
Paste (in Text Editor)
Print (in Text Editor)
Replace (in Text Editor)
Save (in Text Editor)
Save As (in Text Editor)
Undo (in Text Editor)
Key Words
MEGA Format
Rules for Description Statement
Rules for Title Statement
Analysis Preferences (Fisher's Exact Test)
Basic Sequence Statistics
Kimura 2-parameter distance
Kimura gamma distance
Modified Nei-Gojobori Method
No. of differences (Nucleotide)
p-distance (Nucleotide)
Tamura 3-parameter distance
Tamura-Nei distance
Tamura-Nei gamma distance
Jukes-Cantor distance
Jukes-Cantor Gamma distance
Kimura 2-parameter distance
Kimura gamma distance
No. of differences (Nucleotide)
p-distance (Nucleotide)
Tamura 3-parameter distance
Tamura-Nei distance
Tamura-Nei gamma distance
Kimura 2-parameter distance
Kimura gamma distance
Kumar Method
Li-Wu-Luo Method
No. of differences (Nucleotide)
p-distance (Nucleotide)
Pamilo-Bianchi-Li Method
Tamura 3-parameter distance
Tamura-Nei distance
Tamura-Nei gamma distance
Kimura 2-parameter distance
Kimura gamma distance
No. of differences (Nucleotide)
p-distance (Nucleotide)
Tamura 3-parameter distance
Tamura-Nei distance
Tamura-Nei gamma distance
Rules for Format Statement
Tree Data
Compute Menu (in Tree Explorer)
File Menu (in Tree Explorer)
Image Menu (in Tree Explorer)
Information Box
Options dialog box (in Tree Explorer)
Subtree Menu (in Tree Explorer)
Tree Explorer
View Menu (in Tree Explorer)
Guide to Notations Used
MEGA Format
Maximum Parsimony (MP) Method
Minimum Evolution
Minimum Evolution (Construct Phylogeny)
Neighbor Joining (Construct Phylogeny)
Neighbor-Joining (NJ) Method
Phylogenetic Inference
Topological distance
Condensed Trees
UPGMA
UPGMA (Construct Phylogeny)