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Edit | Copy
Edit | Cut
Edit | Font
Edit | Paste
Edit | Undo
Edit menu
Edit Menu in Alignment Explorer
Edit Sequencer Files
Edits
    ASCII
EMF
End
   Keywords for Command Statements (Genes/Domains)
   Keywords for Format Statement (Sequence data)
Entire Population
    Mean Diversity
Equal Input Correction Failed
Equal Input Model
Equal Input Model Gamma
Equal Input Model Gamma rates and Heterogeneous Patterns
Equal Input Model Heterogeneous Patterns
Estimate
   Compute Sequence Diversity
   Gamma distance (Amino acids)
    Dayhoff distance
    interpopulational diversity
Estimating Evolutionary Distances from Nucleotide Sequences
Exclude/include sites
Exit
   Exit
   Exit Editor (in Text Editor)
   File Menu
   File Menu (in Distance Matrix Explorer)
    Distance Data Explorer
    MEGA
Exit Tree Explorer
Exon
   Keywords for Command Statements (Genes/Domains)
   Keywords for Format Statement (Sequence data)
   Setup/Select Genes & Domains Dialog
Expand/contract box
Export All Trees
Export Current Tree
Export Data
   Export Data
   Export Data (in Sequence Data Explorer)
Export/Print Distances
   File Menu (in Distance Data Explorer)
   File Menu (in Distance Matrix Explorer)
Exporting Sequence Data
Exporting Sequence Data dialog

Feature List
Figure Legend
File menu
   File Menu (in Distance Data Explorer)
   File Menu (in Distance Matrix Explorer)
   Main MEGA Window
   Text File Editor and Format Converter
File Menu
File Name
Files
   Export Data (in Sequence Data Explorer)
   File Menu (in Tree Explorer)
   Open Data
    Data | Write Data
    Tree Explorer
    Type
Files Of Type
Find
   Close-Neighbor-Interchange (CNI)
   Code Table Editor
   Find (in Text Editor)
   Find Again (in Text Editor)
   Finding number of sites in pairwise comparisons
   Maximum Parsimony (Construct Phylogeny)
   Minimum Evolution (Construct Phylogeny)
    codon
    ME
    MP
       Close-Neighbor-Interchange (CNI)
       Maximum Parsimony (Construct Phylogeny)
    number
Find Again
Find Text dialog
Fisher's Exact Test
   Analysis Preferences (Fisher's Exact Test)
   Codon Based Fisher's Exact Test
    Selection
Fisher's Exact Test Has Failed
Fixed Column
   Distance Data Explorer
   Distance Matrix Explorer
   Sequence Data Explorer
Fixed Row
   Distance Data Explorer
   Distance Matrix Explorer
   Sequence Data Explorer
Font
Font dialog
   Display Menu (in Sequence Data Explorer)
   Labels tab (in Options dialog box)
Format dialog
Format Statement
   Keywords for Format Statement (Distance data)
   Keywords for Format Statement (Sequence data)
   Rules for Format Statement
    Keywords
       Keywords for Format Statement (Distance data)
       Keywords for Format Statement (Sequence data)
    Rules
Formats
   General Considerations (Distance Data Formats)
   MEGA Format
   Open Data

G+C-content
   Tamura (1992) Distance Could Not Be Computed
   Tamura 3-parameter distance
Gamma
   Gamma distance (Amino acids)
   Gamma Distance Failed Because p > 0.99
   Jukes-Cantor Gamma distance
   Kimura gamma distance
   Tamura-Nei gamma distance
Gamma Correction Failed Because p
Gamma distance
Gamma model
Gaps
    Handling
Gene Names Must Be Unique
General Comments on Statistical Tests
General Considerations
   General Considerations (Distance Data Formats)
   General Considerations (Sequence Data)
Genes
   Setup/Select Genes & Domains Dialog
   Writing Command Statements for Defining Genes and Domains
Genes/Domains
Genes\Domain
Genetic Code
Glutamic Acid
Glycine
Gojobori
Grid
   Distance Data Explorer
   Distance Matrix Explorer
   Sequence Data Explorer
Grishin's distance
Group Name
Groups
   Average Menu (in Distance Data Explorer)
   Average Menu (in Distance Matrix Explorer)
   Compute Between Groups Means
   Compute Net Between Groups Means
   Compute Within Groups Mean
   Data Menu (in sequence Data Explorer)
   Distance Data Explorer
   Sequence Data Explorer
   Setup/Select Taxa & Groups
   Setup/Select Taxa & Groups (in Sequence Data Explorer)
   Sort Sequences by Group and Sequence Names
   Writing Command Statements for Defining Groups of Taxa
    taxa
       Average Menu (in Distance Data Explorer)
       Average Menu (in Distance Matrix Explorer)
       Compute Between Groups Means
       Compute Net Between Groups Means
       Compute Within Groups Mean
       Data Menu (in sequence Data Explorer)
       Distance Data Explorer
       Sequence Data Explorer
       Writing Command Statements for Defining Groups of Taxa
Groups Dialog
Gu and Zhang 1997
Gu and Zhang 1998

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