File Menu
File Menu (in Distance Data Explorer)
File Menu (in Distance Matrix Explorer)
Main MEGA Window
Text File Editor and Format Converter
Export Data (in Sequence Data Explorer)
File Menu (in Tree Explorer)
Open Data
Close-Neighbor-Interchange (CNI)
Code Table Editor
Find (in Text Editor)
Find Again (in Text Editor)
Finding number of sites in pairwise comparisons
Maximum Parsimony (Construct Phylogeny)
Minimum Evolution (Construct Phylogeny)
Close-Neighbor-Interchange (CNI)
Maximum Parsimony (Construct Phylogeny)
First Time User
First Time User
Analysis Preferences (Fisher's Exact Test)
Codon Based Fisher's Exact Test
Distance Data Explorer
Distance Matrix Explorer
Sequence Data Explorer
Distance Data Explorer
Distance Matrix Explorer
Sequence Data Explorer
Display Menu (in Sequence Data Explorer)
Labels tab (in Options dialog box)
Keywords for Format Statement (Distance data)
Keywords for Format Statement (Sequence data)
Rules for Format Statement
Keywords for Format Statement (Distance data)
Keywords for Format Statement (Sequence data)
General Considerations (Distance Data Formats)
MEGA Format
Open Data
Tamura (1992) Distance Could Not Be Computed
Tamura 3-parameter distance
Gamma distance (Amino acids)
Gamma Distance Failed Because p > 0.99
Jukes-Cantor Gamma distance
Kimura gamma distance
Tamura-Nei gamma distance
General Considerations (Distance Data Formats)
General Considerations (Sequence Data)
Setup/Select Genes & Domains Dialog
Writing Command Statements for Defining Genes and Domains
Distance Data Explorer
Distance Matrix Explorer
Sequence Data Explorer
Average Menu (in Distance Data Explorer)
Average Menu (in Distance Matrix Explorer)
Compute Between Groups Means
Compute Net Between Groups Means
Compute Within Groups Mean
Data Menu (in sequence Data Explorer)
Distance Data Explorer
Sequence Data Explorer
Setup/Select Taxa & Groups
Setup/Select Taxa & Groups (in Sequence Data Explorer)
Sort Sequences by Group and Sequence Names
Writing Command Statements for Defining Groups of Taxa
Average Menu (in Distance Data Explorer)
Average Menu (in Distance Matrix Explorer)
Compute Between Groups Means
Compute Net Between Groups Means
Compute Within Groups Mean
Data Menu (in sequence Data Explorer)
Distance Data Explorer
Sequence Data Explorer
Writing Command Statements for Defining Groups of Taxa
Citing MEGA in Publications
Main MEGA Window
Setup/Select Taxa & Groups Dialog
Help Menu
Index
Citing MEGA in Publications
Help Menu
Main MEGA Window
Sort Sequences by Group and Sequence Names
Sort Sequences by Group Name
Sort Sequences By Sequence Name
Distance Data Explorer
Distance Matrix Explorer
Setup/Select Taxa & Groups Dialog
Citing MEGA in Publications
Importing Data From Other Formats
View Menu (in Tree Explorer)
Analysis Preferences (Distance Computation)
Analysis Preferences (Fisher's Exact Test)
Analysis Preferences (Maximum Parsimony)
Analysis Preferences (Minimum Evolution)
Analysis Preferences (NJ/UPGMA)
Analysis Preferences (Z-test of Selection)
Open Data
Reporting Bugs
Distance Data Explorer
Distance Matrix Explorer
Alignment Gaps and Sites with Missing Information
Keywords for Format Statement (Sequence data)
Keywords for Command Statements (Genes/Domains)
Keywords for Format Statement (Sequence data)
Setup/Select Genes & Domains Dialog
Writing Command Statements for Defining Genes and Domains
Writing Command Statements for Defining Groups of Taxa
Jukes-Cantor Distance Failed
Modified Nei-Gojobori Method
Nei-Gojobori Method
Tajima-Nei distance